The detailed information of tRNA gene sequence


Sequence ID>SRA1002292
Genome IDSRR001308.353114
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 124
End posion on genome 40
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
agtattcaat
tRNA gene sequence 
GCCCAGATGTTGGAATTGGTATACAAGTACGCTTGAGGTGCGTATGCCGCAAGGCTTAGG
GGTTCGAGTCCCCTTCTGGGTACTA
Downstream region at tRNA end position 
tatgtataag
Secondary structure (Cloverleaf model)
>SRA1002292	Leu	GAG
                   t      ACTA tatgtataag
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T C C C C     A
      T A A        G      | | | | |     G
    T       G G T T       A G G G G     C
    G         | | |                 T T
    G       A C A A
      T A T        G     TGCCGCAAGGCTT
                    T - A
                    A - T
                    C - G
                    G - C
                    C - G
                  T       T
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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