The detailed information of tRNA gene sequence


Sequence ID>SRA1002294
Genome IDSRR001308.354394
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 247
End posion on genome 173
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
cgctcctcat
tRNA gene sequence 
TCCTCGGTAGCTCAGCGGTAGAGCAACCGGCTGTTAACCGGTTGGTCGTAGGTTCGAATC
CTACCCGGGGAGCCA
Downstream region at tRNA end position 
ccgccttgat
Secondary structure (Cloverleaf model)
>SRA1002294	Asn	GTT
                   t      GCCA ccgccttgat
                     T - A
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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