The detailed information of tRNA gene sequence


Sequence ID>SRA1002297
Genome IDSRR001308.357188
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 182
End posion on genome 257
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
taattgataa
tRNA gene sequence 
GGTGCGGTAGCTCAGTCGGTAGAGCAAAGGACTGAAAATCCTTGTGTCGGCGGTTCGATC
CCGCCCCACACCACAA
Downstream region at tRNA end position 
agccactcta
Secondary structure (Cloverleaf model)
>SRA1002297	Phe	GAA
                   a      ACAA agccactcta
                     G - C
                     G - C
                     T - A
                     G - C
                     C   A
                     G - C
                     G - C          C T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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