The detailed information of tRNA gene sequence


Sequence ID>SRA1002298
Genome IDSRR001308.358015
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 156
End posion on genome 82
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
gcggtcaact
tRNA gene sequence 
GGTCCGGTAGCTCAGTTGGATAGAGCATCAGCCTTCTAAGCTGAGGGTCATTGGTTCGAA
TCCAATCCGGATCACtt
Downstream region at tRNA end position 
agcggataat
Secondary structure (Cloverleaf model)
>SRA1002298	Arg	TCT
                   t      ACtt agcggataat
                     G - C
                     G + T
                     T - A
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T A A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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