The detailed information of tRNA gene sequence


Sequence ID>SRA1002299
Genome IDSRR001308.359534
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 17
End posion on genome 102
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cctcgaatgc
tRNA gene sequence 
GGAGAGGTAGCCTAATTGGTAAGGCAGTAGTCTTGAAAACTACCGCGAGTGATCGCTTGC
AGGTTCGAGTCCTGTCCTCTCCGCCA
Downstream region at tRNA end position 
cctttttatc
Secondary structure (Cloverleaf model)
>SRA1002299	Ser	TGA
                   c      GCCA cctttttatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | | | |     G
    T       T C C G       G C A G G     C
    G       | | | |                 T T
    G       A G G C
      T A          A     CGCGAGTGATCGCTT
                    G - C
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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