The detailed information of tRNA gene sequence


Sequence ID>SRA1002300
Genome IDSRR001308.361411
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 129
End posion on genome 54
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
cgttaactac
tRNA gene sequence 
ACGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGT
CCCTCCTGGCGTGCCA
Downstream region at tRNA end position 
ctcatgtatg
Secondary structure (Cloverleaf model)
>SRA1002300	Trp	CCA
                   c      GCCA ctcatgtatg
                     A - T
                     C - G
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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