The detailed information of tRNA gene sequence


Sequence ID>SRA1002304
Genome IDSRR001308.363546
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 68
End posion on genome 148
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aactaaataa
tRNA gene sequence 
TGCGGGATCGCCTAGTGGTCGAGGGCACAAGGTTCATACCCTTGGATTCAAACATCGCTG
GTTCAAATCCAGCTCCCGCAAttc
Downstream region at tRNA end position 
ttttaactat
Secondary structure (Cloverleaf model)
>SRA1002304	Met	CAT
                   a      Attc ttttaactat
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        C      | | | | |     A
    G       T C C G       G C T G G     C
    G       + | | |                 T T
    T       G G G C
      C G A        A     GATTCAAACATC
                    C - G
                    A - T
                    A - T
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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