The detailed information of tRNA gene sequence


Sequence ID>SRA1002309
Genome IDSRR001308.369115
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 146
End posion on genome 221
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position
ggcgccttaa
tRNA gene sequence
GTCCCGTTCGTCTAGAGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAAT
CCCCTACGGGACGCCA
Downstream region at tRNA end position
cttccgaaca
Secondary structure (Cloverleaf model)
>SRA1002309	Glu	TTC
                   a      GCCA cttccgaaca
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     T - A          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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