The detailed information of tRNA gene sequence


Sequence ID>SRA1002313
Genome IDSRR001308.370081
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 180
End posion on genome 106
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
acataatgat
tRNA gene sequence 
GCGCCCGTAGCTCAGTCGGATAGAGCAACAGCCTTCTAAGCTGTGGGCCAGTGGTTCGAA
TCCACTCGGGCGTACtt
Downstream region at tRNA end position 
caactgttca
Secondary structure (Cloverleaf model)
>SRA1002313	Arg	TCT
                   t      ACtt caactgttca
                     G + T
                     C - G
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C A C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G T G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     GGGCC
                    A - T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK