The detailed information of tRNA gene sequence


Sequence ID>SRA1002314
Genome IDSRR001308.371072
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 162
End posion on genome 246
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
cgcttcccat
tRNA gene sequence
GCCGGGATGGCGGAATCGGTAGACGCAGCGGATTCAAAATCCGCCGCCGCAAGGTGTGAG
GGTTCGAGTCCCTCTCCCGGCACCA
Downstream region at tRNA end position
ataaaatcaa
Secondary structure (Cloverleaf model)
>SRA1002314	Leu	CAA
                   t      ACCA ataaaatcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGTGT
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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