The detailed information of tRNA gene sequence


Sequence ID>SRA1002317
Genome IDSRR001308.371586
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 152
End posion on genome 228
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
ccggtacttt
tRNA gene sequence 
GGGCTTGTAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCAAG
TCTACCCAGGCCCACCA
Downstream region at tRNA end position 
cgcaatattt
Secondary structure (Cloverleaf model)
>SRA1002317	Ile	GAT
                   t      ACCA cgcaatattt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C C A T C     A
      T G A        A      | | | | |     A
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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