The detailed information of tRNA gene sequence


Sequence ID>SRA1002318
Genome IDSRR001308.371962
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 169
End posion on genome 80
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
tgatttacat
tRNA gene sequence 
GCGCGGATGGTGGAATTGGTAGACACGCAAGACTTAAAAATTTTTGTGGCTGAAAAGGCC
GTGCGAGTTCGATTCTCGCTCCGCGCACCA
Downstream region at tRNA end position 
acgaatgaca
Secondary structure (Cloverleaf model)
>SRA1002318	Leu	TAA
                   t      ACCA acgaatgaca
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          T T
                    T     C G C T C     A
      T A A        G      | | | | |     G
    T       G G T G       G C G A G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGTGGCTGAAAAGGCCGT
                    C   T
                    A - T
                    A - T
                    G + T
                    A   A
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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