The detailed information of tRNA gene sequence


Sequence ID>SRA1002320
Genome IDSRR001308.373101
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 183
End posion on genome 261
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgacaattgT
tRNA gene sequence
GGCGCTTTAGCTCAGTTGGTTAGAGCGACGGAATCATAATCCGCAGGTCCGGGGTTCGAG
TCCCTGAAGCGCCAACC
Downstream region at tRNA end position
Aaaaaagttt
Secondary structure (Cloverleaf model)
>SRA1002320	Met	CAT
                   T      AACC Aaaaaagttt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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