The detailed information of tRNA gene sequence


Sequence ID>SRA1002323
Genome IDSRR001308.374360
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 140
End posion on genome 212
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cacatccttg
tRNA gene sequence 
GGGGCCTTAGCTCAGCTGGGAGAGCATCTGCTTTGCAAGCAGAGGGTCATCGGTTCGATC
CCGATAGGCTCCAacc
Downstream region at tRNA end position 
aaaaccttac
Secondary structure (Cloverleaf model)
>SRA1002323	Ala	TGC
                   g      Aacc aaaaccttac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A          C T
                    T     T A G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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