The detailed information of tRNA gene sequence


Sequence ID>SRA1002325
Genome IDSRR001308.376223
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 40
End posion on genome 116
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgcgcagccc
tRNA gene sequence 
GGGCCGGTAGCTCAGGTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGAGGTTCAAC
TCCTCCCCGGCCCACCA
Downstream region at tRNA end position 
tttcatggaa
Secondary structure (Cloverleaf model)
>SRA1002325	Ile	GAT
                   c      ACCA tttcatggaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T C
                    T     C C T C C     A
      G G A        A      | | | | |     A
    T       C T C G       G G A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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