The detailed information of tRNA gene sequence


Sequence ID>SRA1002327
Genome IDSRR001308.376640
Search identical group
Phylum/ClassMetagenomic characterization of a wastewater treatment plant (SRP000180)
Species
Start position on genome 79
End posion on genome 154
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ccccacgagt
tRNA gene sequence
GGGCCTGTAGCGCAGCTGGGAGCGCGCATGAATGGCATTCATGAGGTCACCGGTTCGATC
CCGGTCAGGTCCACCA
Downstream region at tRNA end position
actttctctc
Secondary structure (Cloverleaf model)
>SRA1002327	Ala	GGC
                   t      ACCA actttctctc
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          C T
                    T     T G G C C     A
      C G A        A      | | | | |     G
    T       C G C G       A C C G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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