The detailed information of tRNA gene sequence


Sequence ID>SRA1002341
Genome IDSRR001322.29193
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 29
End posion on genome 115
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cctcaagctc
tRNA gene sequence 
GCCGCGGTGCTGTAATTGGTAGCCAGGAAGGATTTAAAATCCTTTGAACTTTTGTTCGTG
TGGGTTCGAGTCCCACCCGCGGCACCA
Downstream region at tRNA end position 
tgtttgnnnn
Secondary structure (Cloverleaf model)
>SRA1002341	Leu	TAA
                   c      ACCA tgtttgnnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     C A C C C     A
      T A A        G      | | | | |     G
    T       T G T C       G T G G G     C
    G         | | |                 T T
    G       C C A G
      T A G        G     TGAACTTTTGTTCGT
                    A - T
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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