The detailed information of tRNA gene sequence


Sequence ID>SRA1002342
Genome IDSRR001322.29444
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 78
End posion on genome 1
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
gaattgcgtt
tRNA gene sequence
GGGCGGGTAGATCAGCATGGAATGATCGCCACGTTGGCATCGTGGAGGACGCGGGTTCAA
ATCCCGCCCCGTCCACAA
Downstream region at tRNA end position
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002342	Ala	GGC
                   t      ACAA nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    A C G A        A      | | | | |     A
  T         C T A G       G C G G G     C
  G         | | | |                 T T
  G         G A T C
    A A T          G     AGGAC
                    C - G
                    C - G
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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