The detailed information of tRNA gene sequence


Sequence ID>SRA1002343
Genome IDSRR001322.36815
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 92
End posion on genome 20
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
gggcaaagct
tRNA gene sequence 
GCCCGAGTAGCGCAATGGTAGCGCAACCGACTTGTAATCGGTAGGTTGGTGGGTTCGAGT
CCCCTCTCGGGCTtgg
Downstream region at tRNA end position 
ttggattttc
Secondary structure (Cloverleaf model)
>SRA1002343	Thr	TGT
                   t      Ttgg ttggattttc
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C          T G
                    T     T C C C C     A
        A A        A      +   | | |     G
      T     C G C G       G T G G G     C
      G     | | | |                 T T
      G     G C G C
        T A        A     AGGTTG
                    A - T
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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