The detailed information of tRNA gene sequence


Sequence ID>SRA1002348
Genome IDSRR001322.50275
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 3
End posion on genome 80
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnaa
tRNA gene sequence 
GGGGCTGTCGGCTAGCTTGGTCTAGGCTTGGAGACTTGGGCTCTCTAGACCCCGGTTCAA
ATCCGGGCAGCCCCACCA
Downstream region at tRNA end position 
tttttttggg
Secondary structure (Cloverleaf model)
>SRA1002348	Pro	TGG
                   a      ACCA tttttttggg
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
    T C G A        C      | | | | |     A
  T         T C G G       C C C G G     C
  G         + | | +                 T T
  G         G G C T
    T C T A        T     AGAC
                    G + T
                    G - C
                    A - T
                    G - C
                    A - T
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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