The detailed information of tRNA gene sequence


Sequence ID>SRA1002354
Genome IDSRR001322.61757
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 107
End posion on genome 21
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aataaatctt
tRNA gene sequence 
GCCGGAGTGGCGGAATCGGTAGACGCGCTGGACTCAAAATCCAGTGGGGTTTATCCCCCG
TGTGGGTTCGACTCCCACCTCCGGCACtt
Downstream region at tRNA end position 
ccctggggca
Secondary structure (Cloverleaf model)
>SRA1002354	Leu	CAA
                   t      ACtt ccctggggca
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T C
                    T     C A C C C     A
      T A A        G      | | | | |     G
    C       G G C G       G T G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGGTTTATCCCCCGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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