The detailed information of tRNA gene sequence


Sequence ID>SRA1002362
Genome IDSRR001322.71991
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 104
End posion on genome 29
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tattgccttG
tRNA gene sequence
GGGCCCATAGCTCAGTTGGCAGAGCCACCGGCTCATAACCGGTCGGTCCCTGGTTCGATC
CCAGGTGGCCCACCAt
Downstream region at tRNA end position
ttttcttgta
Secondary structure (Cloverleaf model)
>SRA1002362	Met	CAT
                   G      CCAt ttttcttgta
                     G   A
                     G - C
                     G - C
                     C   C
                     C - G
                     C - G
                     A - T          C T
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      C A          C     CGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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