The detailed information of tRNA gene sequence


Sequence ID>SRA1002372
Genome IDSRR001322.108536
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 115
End posion on genome 39
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
nnnnnntgta
tRNA gene sequence 
TGCCCCGTAGCTTAGTGGTTTAAGGCGTCAGCCTTGTAAGCTGAAGATCCCGGGTTCGAA
TCCCGGCGGGGGCTCCA
Downstream region at tRNA end position 
ctcaagaact
Secondary structure (Cloverleaf model)
>SRA1002372	Thr	TGT
                   a      TCCA ctcaagaact
                     T   C
                     G   G
                     C - G
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G G C C C     A
      T G A        A      | | | | |     G
    G       T T C G       C C G G G     C
    G       | + | |                 T T
    T       A G G C
      T T A        G     AGATC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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