The detailed information of tRNA gene sequence


Sequence ID>SRA1002373
Genome IDSRR001322.110064
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 102
End posion on genome 30
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
agttagtttt
tRNA gene sequence 
GGCGGTGTAGCCAAGAGGTTAAGGCAGGGGTCTGCAAAACCCCGATACAGCGGTTCGAAT
CCGCTCGCCGCCTttt
Downstream region at tRNA end position 
cttaactaag
Secondary structure (Cloverleaf model)
>SRA1002373	Cys	GCA
                   t      Tttt cttaactaag
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T + G
                     G - C          T A
                    T     T C G C C     A
      A G A        A      | | | | |     G
    G       A C C G       A G C G G     C
    G         | | |                 T T
    T       A G G C
      T A          A     GATAC
                    G - C
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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