The detailed information of tRNA gene sequence


Sequence ID>SRA1002374
Genome IDSRR001322.113002
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 28
End posion on genome 110
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgttcggagg
tRNA gene sequence 
GCGGGGTTGCCCTAGCCTGGTAGGGGCAGGCCTGCTAAGCCTGTGGTCTTCGGGCCGCGC
GGGTTCAAATCCCGCACCCCGCGnnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002374	Ser	GCT
                   g      Gnnn nnnnnnnnnn
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C G C C C     A
      C G A        G      | | | | |     A
    C       T C C C       G C G G G     C
    T       | | | |                 T T
    G       A G G G
      G T          G     TGGTCTTCGGGCCGC
                    C - G
                    A - T
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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