The detailed information of tRNA gene sequence


Sequence ID>SRA1002381
Genome IDSRR001323.436
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 10
End posion on genome 87
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ngtaaaatgt
tRNA gene sequence 
CGGGGCGTAGCGCAGTTTGGAAGCGCACCTGAATGGGGTTCAGGGGGGTCGGAGGTTCAA
GTCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
aaatatctac
Secondary structure (Cloverleaf model)
>SRA1002381	Pro	GGG
                   t      ACCA aaatatctac
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T C T C C     A
      T G A        A      + | | | |     A
    T       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G A A        A     GGGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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