The detailed information of tRNA gene sequence


Sequence ID>SRA1002388
Genome IDSRR001323.35260
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 100
End posion on genome 23
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcgaaaacat
tRNA gene sequence 
GGGGCTGTCGGCTAGCTTGGTCTAGGCTAGGAGCCTCGGGCGCTCTTGACCCCGGTTCGA
ATCCGGGCAGCCCCACCA
Downstream region at tRNA end position 
attttggttt
Secondary structure (Cloverleaf model)
>SRA1002388	Pro	CGG
                   t      ACCA attttggttt
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
    T C G A        C      | | | | |     G
  T         T C G G       C C C G G     C
  G         + | | +                 T T
  G         G G C T
    T C T A        A     TGAC
                    G + T
                    G - C
                    A - T
                    G - C
                    C - G
                  C       C
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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