The detailed information of tRNA gene sequence


Sequence ID>SRA1002394
Genome IDSRR001323.43071
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 13
End posion on genome 89
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctttttaagt
tRNA gene sequence 
GGCGCATTCGTCTAGTGGCCTAGGACACCTCCCTCTCAAGGAGGAGATCACCGGTTCGAA
TCCGGTATGCGCTACCA
Downstream region at tRNA end position 
ttatcacttt
Secondary structure (Cloverleaf model)
>SRA1002394	Glu	CTC
                   t      ACCA ttatcacttt
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T - A          T A
                    T     T G G C C     A
      T G A        C      | | | | |     G
    G       T C T G       A C C G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     AGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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