The detailed information of tRNA gene sequence


Sequence ID>SRA1002403
Genome IDSRR001323.58166
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 10
End posion on genome 89
Amino Acid Arg
Anticodon TCG
Upstream region at tRNA start position 
naactatttt
tRNA gene sequence 
GGGCCCGTAGCCTAGTCTGGATTAAGGCGCTGGCCTTCGGAGCCGGGAGAACAGGGGTTC
AAATCCCCTCGGGCCCGCTA
Downstream region at tRNA end position 
aaagctcttt
Secondary structure (Cloverleaf model)
>SRA1002403	Arg	TCG
                   t      GCTA aaagctcttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T C C C C     A
    C T G A        A      | | | | |     A
  T         T C C G       A G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T T A        G     GAGAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    T C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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