The detailed information of tRNA gene sequence


Sequence ID>SRA1002406
Genome IDSRR001323.61612
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 20
End posion on genome 92
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctgcctgc
tRNA gene sequence 
GGCAGCGTAGCTCAGTGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGTGGGTTCAAATC
CCTCCGCTGCCACtt
Downstream region at tRNA end position 
tttgnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002406	Met	CAT
                   c      ACtt tttgnnnnnn
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      |   | | |     A
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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