The detailed information of tRNA gene sequence


Sequence ID>SRA1002416
Genome IDSRR001323.88159
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 80
End posion on genome 6
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtagcggggt
tRNA gene sequence 
CGCGGGGTAGAGCAGTGGTAGCTCGTCTGGCTCATAACCAGGAGGACGTGGGTTCGAATC
CCACCCCCGCTACCA
Downstream region at tRNA end position 
aagatnnnnn
Secondary structure (Cloverleaf model)
>SRA1002416	Met	CAT
                   t      ACCA aagatnnnnn
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C A C C C     A
        G A        A      | | | | |     G
      T     C G A G       G T G G G     C
      G     | | | |                 T T
      G     G C T C
        T A        G     AGGAC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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