The detailed information of tRNA gene sequence


Sequence ID>SRA1002433
Genome IDSRR001323.132222
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 95
End posion on genome 20
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcatatagt
tRNA gene sequence 
GCCGGGGTGGCCGAACGGTTCAGGCGGCGGCCTGCAGAGCCGCTATATATGGGTTCAATT
CCCATCCCCGGCTCCT
Downstream region at tRNA end position 
taatacgggc
Secondary structure (Cloverleaf model)
>SRA1002433	Cys	GCA
                   t      TCCT taatacgggc
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T T
                    T     T A C C C     A
      C A A        G      | | | | |     A
    G       G C C G       A T G G G     C
    G         | | |                 T T
    T       A G G C
      T C          G     TATAT
                    G - C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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