The detailed information of tRNA gene sequence


Sequence ID>SRA1002435
Genome IDSRR001323.139891
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 104
End posion on genome 29
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
nnnncttcct
tRNA gene sequence 
NCGGGGGTAGCTCAGTTGGTAGAGCATCGGCCTTCCAAGCCGATGGTCGCGGGTTCGAAT
CCCGTTCCCCGCTCCC
Downstream region at tRNA end position 
atggtgagcg
Secondary structure (Cloverleaf model)
>SRA1002435	Gly	TCC
                   t      TCCC atggtgagcg
                     N   C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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