The detailed information of tRNA gene sequence


Sequence ID>SRA1002440
Genome IDSRR001323.149686
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 40
End posion on genome 114
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgcttttgT
tRNA gene sequence 
GGGCTCGTAGCTCAGTGGCAGAGCCGGCCGGCTCATAACCGGTTGGTCGTAGGTTCGAAT
CCTGCCGAGCCCATnn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002440	Met	CAT
                   T      ATnn nnnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G T C C     A
      T G A        A      | + | | |     G
    G       C T C G       G T A G G     C
    G         +   |                 T T
    C       A G C C
      A G          G     TGGTC
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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