The detailed information of tRNA gene sequence


Sequence ID>SRA1002453
Genome IDSRR001324.20310
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 23
End posion on genome 100
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gtctttaatg
tRNA gene sequence 
GGGCCCGTAGCTCAGCTTGGCTGGAGCGTTCGGCTGATAACCGGAAGGTCGAGGGTTCGA
ATCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
ctcaaaaggt
Secondary structure (Cloverleaf model)
>SRA1002453	Ile	GAT
                   g      ACCA ctcaaaaggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C T C C C     A
    T C G A        A      | | | | |     G
  T         C T C G       G A G G G     C
  G         | | | |                 T T
  G         G A G C
    C T G          G     AGGTC
                    T - A
                    T + G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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