The detailed information of tRNA gene sequence


Sequence ID>SRA1002454
Genome IDSRR001324.21346
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 19
End posion on genome 90
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttctgcctac
tRNA gene sequence 
GGCAGCGTAGCTCAGAGGTAGAGCAGAGGACTCATAAGCCTTTGGTCGTGGGTTCGAATC
CCTCCGCTGCCAgtt
Downstream region at tRNA end position 
attttgtgnn
Secondary structure (Cloverleaf model)
>SRA1002454	Met	CAT
                   c      Agtt attttgtgnn
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     C T C C C     A
        G A        A      |   | | |     G
      A     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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