The detailed information of tRNA gene sequence


Sequence ID>SRA1002457
Genome IDSRR001324.24644
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 106
End posion on genome 19
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position
nnnnnnnntt
tRNA gene sequence
GGAGAGGTGCTGGAGTGGCCTATCAGGCGCGCCTGGAGAGCGCGTGTAGCTTTTGCTACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position
tcttaccctt
Secondary structure (Cloverleaf model)
>SRA1002457	Ser	GGA
                   t      GCCA tcttaccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G G T C       G T G G G     C
    G       + | | |                 T T
    C       T C A G
      C T A        G     TGTAGCTTTTGCTACC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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