The detailed information of tRNA gene sequence


Sequence ID>SRA1002458
Genome IDSRR001324.26299
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 25
End posion on genome 112
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
aggttatccg
tRNA gene sequence 
GCCGAAGTGGCGGAATGGTAGACGCGGCAGTCTCAAAAACTGTTGAGGGGCGACCCTCGT
GTCGGTTCGAGTCCGACCTTCGGCACTA
Downstream region at tRNA end position 
gatacggnnn
Secondary structure (Cloverleaf model)
>SRA1002458	Leu	CAA
                   g      ACTA gatacggnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     C A G C C     A
      T A A        G      | | | | |     G
    G       G G C G       G T C G G     C
    G         | | |                 T T
    T       A C G C
      A G          G     TGAGGGGCGACCCTCGT
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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