The detailed information of tRNA gene sequence


Sequence ID>SRA1002480
Genome IDSRR001324.71539
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 75
End posion on genome 1
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttaactaatg
tRNA gene sequence 
GGGGCTGTAGCTCAGCTGGGAGAGCGCCTCCTTTGCACGGAGGAGGTCAGGGGTTCGAGT
CCCCTCAGCTCCACCn
Downstream region at tRNA end position 
nnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002480	Ala	TGC
                   g      ACCn nnnnnnnnnn
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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