The detailed information of tRNA gene sequence


Sequence ID>SRA1002483
Genome IDSRR001324.73535
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 107
End posion on genome 31
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
nnncttgtaa
tRNA gene sequence 
GCCGAGGTGACAGAGTCCGGTAATGTGATGGCCTGCAGAGCCATTTAATAGGGGTTCAAA
TCCCCTCCTCGGCTCCA
Downstream region at tRNA end position 
cacacgtaat
Secondary structure (Cloverleaf model)
>SRA1002483	Cys	GCA
                   a      TCCA cacacgtaat
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T C C C C     A
      T G A        G      | | | | |     A
    C       G A C A       A G G G G     C
    C         | | |                 T T
    G       A T G T
      G T A        G     TTAAT
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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