The detailed information of tRNA gene sequence


Sequence ID>SRA1002492
Genome IDSRR001325.158
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 82
End posion on genome 9
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
catttanaaa
tRNA gene sequence 
GGGCTCGTAGCTCAGCTGGTATGAGCGCTGCCTTCGCAAGGCAGAGGCCGCGGGTTCAAA
TCCCGCCGAGTCCAttg
Downstream region at tRNA end position 
aatagnnnnn
Secondary structure (Cloverleaf model)
>SRA1002492	Ala	CGC
                   a      Attg aatagnnnnn
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A T        G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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