The detailed information of tRNA gene sequence


Sequence ID>SRA1002494
Genome IDSRR001325.9626
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 77
End posion on genome 4
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
nntagccatt
tRNA gene sequence 
GGCGGTGTAGCTCAGGCGGTTAGAGCATGCGGCTCATATCCGCAGTGTCGGGGTTCAAGT
CCCTCCACCGCCACtt
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>SRA1002494	Met	CAT
                   t      ACtt tnnnnnnnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      G G A        A        + | | |     A
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGT
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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