The detailed information of tRNA gene sequence


Sequence ID>SRA1002506
Genome IDSRR001325.32625
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 3
End posion on genome 78
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
nnnnnnnnta
tRNA gene sequence 
GGGCGATTAGCTCAGCGGTTAGAGCGCTTGCTTCACACGCAAGAGGTCACTGGTTCAAGT
CCAGTATCGCCCACCA
Downstream region at tRNA end position 
taaaggtaat
Secondary structure (Cloverleaf model)
>SRA1002506	Val	CAC
                   a      ACCA taaaggtaat
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          T G
                    T     T G A C C     A
      C G A        A      | | | | |     A
    G       C T C G       A C T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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