The detailed information of tRNA gene sequence


Sequence ID>SRA1002512
Genome IDSRR001325.68866
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 13
End posion on genome 86
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
catttagaaa
tRNA gene sequence 
GGGCTCGTAGCTCAGCTGGTATGAGCGCTGCCTTCGCAAGGCAGAGGCCGCGGGTTCAAA
TCCCGCCGAGTCCAttg
Downstream region at tRNA end position 
aatagaagtt
Secondary structure (Cloverleaf model)
>SRA1002512	Ala	CGC
                   a      Attg aatagaagtt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
      C G A        A      | | | | |     A
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A T        G     AGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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