The detailed information of tRNA gene sequence


Sequence ID>SRA1002514
Genome IDSRR001325.70904
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 1
End posion on genome 88
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAAGGGTGTGCTGAATTGGTTAAGGCGCTGGTTTTGAAAACCAGTGGGTATTTACCCAT
ACGGGTTCGAGTCCCGTCCCTTCCGCTA
Downstream region at tRNA end position 
tggctcgagt
Secondary structure (Cloverleaf model)
>SRA1002514	Ser	TGA
                   n      GCTA tggctcgagt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T G
                    T     T G C C C     A
    T A A G        G      | | | | |     G
  T         T C G T       A C G G G     C
  G         | |                     T T
  G         A G G C
    T T A          G     TGGGTATTTACCCAT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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