The detailed information of tRNA gene sequence


Sequence ID>SRA1002522
Genome IDSRR001325.87755
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 115
End posion on genome 43
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
nnnnnnnncg
tRNA gene sequence 
TAGGCAATAGCTTAATCCGGGAAAGCATTGGACTGAAGATTCAAAGTTCCAAGTTCGAAT
CTCGGTTGCCTCAtaa
Downstream region at tRNA end position 
ttaaaatgac
Secondary structure (Cloverleaf model)
>SRA1002522	Phe	GAA
                   g      Ataa ttaaaatgac
                     T   C
                     A - T
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     G G C T C     A
      T A A        A      | |   | |     G
    C       T T C G       C C A A G     C
    C       | | | |                 T T
    G       A A G C
      G G A        A     AGTT
                    T - A
                    T - A
                    G - C
                    G + T
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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