The detailed information of tRNA gene sequence


Sequence ID>SRA1002525
Genome IDSRR001325.93551
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 117
End posion on genome 30
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
nnnnattcgg
tRNA gene sequence 
GCGGGGGTAGCCAAGTCAGGTCAAAGGCGTGAGGTTTAGGACCTCATCCCGAAGGGGTTC
GCAGGTTCGAATCCTGTCCCCCGCACCA
Downstream region at tRNA end position 
cccaagaaag
Secondary structure (Cloverleaf model)
>SRA1002525	Leu	TAG
                   g      ACCA cccaagaaag
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G T C C     A
    C T G A        A      + | | | |     G
  A         A C C G       G C A G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCCCGAAGGGGTTC
                    T - A
                    G - C
                    A - T
                    G - C
                    G - C
                  T       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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