The detailed information of tRNA gene sequence


Sequence ID>SRA1002527
Genome IDSRR001325.101624
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 111
End posion on genome 37
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
nnnnnttagt
tRNA gene sequence 
GGGCCGTTAGCTCAGACCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCGCGTTCGAT
TCGCGCACGGCCCACtt
Downstream region at tRNA end position 
cccacttttt
Secondary structure (Cloverleaf model)
>SRA1002527	Lys	TTT
                   t      ACtt cccacttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C G C G C     A
      A G A        A      | | | | |     G
    C       C T C G       G C G C G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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