The detailed information of tRNA gene sequence


Sequence ID>SRA1002529
Genome IDSRR001325.103422
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 83
End posion on genome 9
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accagagaag
tRNA gene sequence 
GGCGGCGTAGCTCAACCGGTTTAGAGCGCTCGGCTCATATCCGAGAGGTTCGGGGTTCGA
GTCCCTGCGCCGCCAgtt
Downstream region at tRNA end position 
gttctnnnnn
Secondary structure (Cloverleaf model)
>SRA1002529	Met	CAT
                   g      Agtt gttctnnnnn
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
    C C A A        A      | + | | |     G
  G         C T C G       C G G G G     C
  G         | | | |                 T T
  T         G A G C
    T T A          G     AGGTT
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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