The detailed information of tRNA gene sequence


Sequence ID>SRA1002530
Genome IDSRR001325.103927
Search identical group
Phylum/ClassMetagenomic signatures of the Peru Margin subseafloor biosphere (SRP000183)
Species
Start position on genome 111
End posion on genome 37
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position
nnnnnnttgt
tRNA gene sequence
GGGCCGTTAGCTCAGACCGGTAGAGCAGCGGACTTTTAATCCGTTGGTCGCGCGTTCGAT
TCGCGCACGGCCCACtt
Downstream region at tRNA end position
cccacttttt
Secondary structure (Cloverleaf model)
>SRA1002530	Lys	TTT
                   t      ACtt cccacttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     C G C G C     A
      A G A        A      | | | | |     G
    C       C T C G       G C G C G     C
    C       | | | |                 T T
    G       G A G C
      G T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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